Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927387.1_cds_XP_016475211.1_67159
CDS Infomation

[gene=LOC107796899] [db_xref=GeneID:107796899] [protein=BTB/POZ domain-containing protein At5g17580-like] [protein_id=XP_016475211.1] [location=complement(join(9384..10994,11078..11147,11236..11270))] [gbkey=CDS]
Sequence

ATGGCCACAAGGAAAAACATTGCATCTCCATCCAGGAAATCAGTGTCTGCTTCATCATCA
GATGTTCAGCTCCACATATGTGGAGTACCATTTTCCTTGAATAGGGAAGTTTTGACTGCA
AAATCTGCAAAGCTAGGTGCAGTGCTGAAAGAGAATCCTGAAGATGATGTTTCTCATTTG
CTAGGAGACATTCCCACTGATTCCAAAACTTTTGAGCTAGTCGCAAGGTTCTGCCATGGT
TTTGACATAAGCCTATCGCCTGAGAATGTTATTAAAGTCCTTTGCCTTGCTAACTATCTT
GGAATGTCCGAGGATCACAGCACAAACAACCTCACAAAGAAGGCTTGTTTCTACTTTCAA
AATAATGTCCTTCCTAGCTGGAACAAGTGTATTAAAGCCCTCAAATCTGCTGAAACCATT
CTTCAACAAGCTGCAGATCTTGCCCTTGTCGATGCCTGTGCAGAATCGATCATCACCAAA
GTAGTGCATGATCCAAGTCTTCTTGGAGAACCGATTAGGAACGTAACAACAACAGATGAT
GACAGTGAGAACGACGAAAGTACCTATAAGTCAAATGTGAGGAGGAGGCTCTTTGTTCTT
GACTGGAAATCTGAGGACTTGACAGTACTTTCCATTGCTCTATACGAGCCCATTATTCAT
GCAATTATTCATCAAAATGTCCCTCTGGACTATGTGGCATCATCTCTGTTTCAGTATCTC
ATAAAATGGGTTTTTCCGGGGACTAAAGGAGAAGATGAGACATCAACTTATGAGAGGAAT
TCTCAGAGAGAGATCATTGAAGCAGTGGAGAGACTGTTGCCGCAAGAGAGGGGGCTGATC
CCCTGTTCTTTGCTCTCTCAAATGTTGCAATCTGCAATAATGTTGGATGCCAATGCTGAA
TGTAAAAGTGGATTGGAAACTAGAATAGGAAAGCAGCTGGACCAGGCAACTGTCAAGGAC
CTCTTAATACCTGCACAAGGATATGCAAAAGAAGAGCAGTATGACACTGAATGTGTGAAA
AGGATAATGAAGTATTTCTACAGCAATTACACAAACAAAGACAAATCTGGCCTGATCGTC
GTGGCACAACTTATTGATGACTTCTTGGCTGAGGTTGCAAGTGACAGAGATTTGAAGTTG
AAGACATTTTTAACACTAGCAGATTTATCACTAGCAGCATCAGAAGGAACTCATAGGAAT
TCTGATGGAATATATAAAGCAATTGATATATACTTGGACAAGCACAGATATCTCACGGAT
AGAGAAAGGGAAGAAGTTTGCAGGATGTTGGATTTCAACAACCTGTCTCCTGAAGCCTGT
GAACATGCTGCACACAACGAAAAGCTACCAGTACGAGTGATGGTGCAGATTTTGTTTTCT
GTGCAGTTGAAGTTGAAGGATACTGTGGCTAAGAGAATACAGAGGGGTTCTGGAAACCTA
TTGTTGAAGCTGGAAGAAGACGAGGAAGATGCAATGAGGACAAGCAGCAGTGAAGAGGAA
GTGAAAGCAGAGATGGAAAAGATGGGAAGCAAGGTGCTGGAACTGGAGAAAGAATGTCAT
ATGATGAGAAGGGCAATTCAGAGAGGTAGCTACCAGCACAAGATTCAGAAGGAGAAAACA
AGCATGTGGAAAGAAATGAAGAGGAAGTTTGATTGCATGACAAGCTTGCATGAGACAAAT
TGCCATGTGAAGAAGAAAAAGGTGCATCCAAGATAG

Peptide Sequence

PEP ID

XP_016475211.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein At5g17580-like [Nicotiana tabacum]
Sequence

MATRKNIASPSRKSVSASSSDVQLHICGVPFSLNREVLTAKSAKLGAVLKENPEDDVSHL
LGDIPTDSKTFELVARFCHGFDISLSPENVIKVLCLANYLGMSEDHSTNNLTKKACFYFQ
NNVLPSWNKCIKALKSAETILQQAADLALVDACAESIITKVVHDPSLLGEPIRNVTTTDD
DSENDESTYKSNVRRRLFVLDWKSEDLTVLSIALYEPIIHAIIHQNVPLDYVASSLFQYL
IKWVFPGTKGEDETSTYERNSQREIIEAVERLLPQERGLIPCSLLSQMLQSAIMLDANAE
CKSGLETRIGKQLDQATVKDLLIPAQGYAKEEQYDTECVKRIMKYFYSNYTNKDKSGLIV
VAQLIDDFLAEVASDRDLKLKTFLTLADLSLAASEGTHRNSDGIYKAIDIYLDKHRYLTD
REREEVCRMLDFNNLSPEACEHAAHNEKLPVRVMVQILFSVQLKLKDTVAKRIQRGSGNL
LLKLEEDEEDAMRTSSSEEEVKAEMEKMGSKVLELEKECHMMRRAIQRGSYQHKIQKEKT
SMWKEMKRKFDCMTSLHETNCHVKKKKVHPR

Transcript Sequence

Gene sequence data has not been registered.